PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX80950.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 291aa MW: 33974.2 Da PI: 9.4905

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX80950.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2.1e-18	46	93	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll++ v+++G g+W+++ar g++R +k+c++rw +yl RDX80950.1 46 KGPWTAEEDRLLLEHVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 93 79********************************************97 PP
2	Myb_DNA-binding	49.8	7.8e-16	99	143	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ ++++++ ++G++ W+tIar ++ gRt++++k++w+++ RDX80950.1 99 RGQITPQEESIILELHGRWGNR-WSTIARSLP-GRTDNEIKNYWRTH 143 7888****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MQETLDPNQC HYFIQARTLK PYCMYWGEVM AGHMGRGVIK EEVWRKGPWT AEEDRLLLEH 60 VRLHGEGRWN SVARLAGLKR NGKSCRLRWV NYLRPDLKRG QITPQEESII LELHGRWGNR 120 WSTIARSLPG RTDNEIKNYW RTHFKKKAKS PSDSAEKARN RLLRKQQFQQ QQQQQQQLQH 180 QQAQHHQQQQ MHFNFDMKSI MALLEDNSHR TPYISQSRQE MVNMHQNTTE EQGYLYSMLN 240 GNSSASSAPE TSGEEILWDG LWNIDDVHGN FSTVANAASK AGLYNLVAPF C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	9e-85	MYB family protein