PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX81229.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

YABBY

Protein Properties

Length: 187aa MW: 20923.8 Da PI: 8.9629

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX81229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	233.5	4.8e-72	6	163	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103 ++e+vCyv+CnfCnt lavsvP +sl+++vtvrCGhC++llsvn+ + q+ ++++ + + + +l+ ++ ++++ +ke +s++ +s e RDX81229.1 6 MATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQAFPSQDT----QRFSTVGKLQRQHISVQEACSKELGSSSKCKS---FE 97 689***************************************************97....22223344444444444444444444444444...35 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 d+e pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl RDX81229.1 98 PIDHEQPRIPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 163 67889999999.9**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MSMEMMATER VCYVHCNFCN TTLAVSVPCS SLLTIVTVRC GHCANLLSVN MGASLQAFPS 60 QDTQRFSTVG KLQRQHISVQ EACSKELGSS SKCKSFEPID HEQPRIPPIR PPEKRQRVPS 120 AYNRFIKEEI QRIKASNPDI SHREAFSTAA KNWAHFPHIH FGLKLDGSNK QAKLDQGDGT 180 QKSNGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	5e-72	YABBY family protein