PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX81699.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 214aa MW: 24586.9 Da PI: 6.773

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX81699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.7	5.2e-40	12	110	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 aCaaCk++rrkC ++C+lapyfp++++k+f n+h+lFG+ ++++++k l++++r+ ams++vy++++rardPv G+++++++lq+q+e ++ael+l+ + RDX81699.1 12 ACAACKYQRRKCGSNCILAPYFPHDRQKQFLNAHRLFGVGKITNMIKPLEPHDRDVAMSTIVYQSDMRARDPVGGCFRIVQQLQSQIEYTNAELHLVLQ 110 7*********************************************************************************************98865 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MDNSMSRSTT QACAACKYQR RKCGSNCILA PYFPHDRQKQ FLNAHRLFGV GKITNMIKPL 60 EPHDRDVAMS TIVYQSDMRA RDPVGGCFRI VQQLQSQIEY TNAELHLVLQ RLSFCRGQAT 120 SCDIINSTPQ PYFEQMSHEQ MSHHQQQHLV NYNPFQEDIN MWTIQNSLPP LSPLSLQDDN 180 NQDPMVDCVY DEKPVLDLMN KMNSDASPKL IHPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	2e-48	LBD family protein