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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX81746.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 274aa MW: 30477.5 Da PI: 5.4636 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 61.6 | 1.8e-19 | 89 | 139 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr++ +g+WvAeIr p++ r+r +lg+f+taeeAa +++a+ kl+ge
RDX81746.1 89 LYRGVRQRQ-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALGYDNAAFKLRGE 139
59****999.**********965...5**************************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 274 aa Download sequence |
MATITEMFSD EELMKALEAS MKSDSCSTCY CCYSSSSPNL SLSSSQASSI KLNQLTPCQV 60 FQIQAQIQVP RGQNRLLGPK AIPMKPRKLY RGVRQRQWGK WVAEIRLPKN RTRLWLGTFD 120 TAEEAALGYD NAAFKLRGEN ARLNFPHLRH HEFGEYKPLP SAVEAKLQAI CESMVNSPEK 180 LKTQTRKEET ETSELENQTS SALSDESFAG SSSPESDITF LDFSDSYGTD YLGLDLEKYP 240 SVEIDWAALS ESFVLLAGAI QFLTVAVAKS GCKV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G39780.1 | 3e-69 | ERF family protein | ||||




