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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX81836.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 185aa MW: 20265.7 Da PI: 5.3553 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 55.6 | 1.3e-17 | 28 | 78 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr ++ +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+ +l+g
RDX81836.1 28 PVYRGVRKRR-WGKWVSEIREPRK---KSRIWLGSFSAPEMAARAYDVAAYCLKG 78
68*****887.**********843...6*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 185 aa Download sequence |
MDHQPPPRPE DDPTAAATDT PRGGTRHPVY RGVRKRRWGK WVSEIREPRK KSRIWLGSFS 60 APEMAARAYD VAAYCLKGRK AQLNFPDEVE SLPLPSTRTA RDIQAAAAKA ARMMKASADD 120 DKSGIASDGD SGGDDFWGQI ELPELMDGEC CWSCPGGSSW TSSGDIAAWP EVELLPQQPS 180 FMACL |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G01250.1 | 1e-46 | ERF family protein | ||||




