PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX81889.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

YABBY

Protein Properties

Length: 190aa MW: 21038.9 Da PI: 10.0136

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX81889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	152.1	5.2e-47	10	156	2	163
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 d++ se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ + + + + +h +l + + sn +k +++s+s ss RDX81889.1 10 DLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPTSQNQSIDH-----------TLSL--QGFYSNAKKGQASSSS-SSP- 93 77899***********************************9866544444444444433...........3322..3333333333222222.222. PP YABBY 101 lsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 +++++ +p++ v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa f RDX81889.1 94 -TTSNESVSPKAASfVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARF 156 .244555666666669********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MNHDDKLTMD LVPPSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP 60 PTSQNQSIDH TLSLQGFYSN AKKGQASSSS SSPTTSNESV SPKAASFVVK PPEKKHRLPS 120 AYNRFMKEEI QRIKAANPEI PHREAFSAAA KNWARFIPNS PTSSVSASKV NVRIRRLMEV 180 WHDGLERNGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	4e-66	YABBY family protein