PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX82056.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 364aa MW: 40895.8 Da PI: 6.8655

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX82056.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.2	2.4e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+ ++++ G+g +W + ++++g++R++k+c++rw++yl RDX82056.1 14 KGPWSPEEDAALKAYIEKNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	40	9.2e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ RDX82056.1 69 GGFTEEEDNIICNLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGRAPCCDKT NVKKGPWSPE EDAALKAYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEEEDNIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR 120 RKQSNFNAKD TTNNGIEENS YSNALSSSAL ERLQLHMQLQ SLQNPFSFYN NPAMWPKLHP 180 FQEKMMQSLQ SLNDGSNPVM QSALPSPHVE QGQKDEFYKP QQDGAKINNN PQVLLENIPL 240 SNSGVSFVAS GSNNPMHSSL ALAPRAEAVE QITNNVGLQQ LGALQNELDD ILNNRTMGYV 300 PQEDHHMAEF EYCFREMNGS KDSLIWWSND SDAKSASSNS WDSSTTPALL TQGMFQDYEL 360 GYSL

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGRAPCCDKT NVKKGPWSPE EDAALKAYIE KNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FTEEEDNIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR  120
RKQSNFNAKD TTNNGIEENS YSNALSSSAL ERLQLHMQLQ SLQNPFSFYN NPAMWPKLHP  180
FQEKMMQSLQ SLNDGSNPVM QSALPSPHVE QGQKDEFYKP QQDGAKINNN PQVLLENIPL  240
SNSGVSFVAS GSNNPMHSSL ALAPRAEAVE QITNNVGLQQ LGALQNELDD ILNNRTMGYV  300
PQEDHHMAEF EYCFREMNGS KDSLIWWSND SDAKSASSNS WDSSTTPALL TQGMFQDYEL  360
GYSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-89	MYB family protein