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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX82464.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | bHLH | ||||||||
| Protein Properties | Length: 261aa MW: 29315.2 Da PI: 7.6411 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 24 | 7.2e-08 | 154 | 201 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR +iN+++ L+ ++P + k + a +L + ++Y++sLq
RDX82464.1 154 SHSLAERVRRGKINEKLRCLQNIVPGC----YKTMGMAVMLDEIINYVQSLQ 201
8*************************9....35599999**********998 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 261 aa Download sequence |
MAEFTENLQS NIRPSSFPFL DIDPSMELLN QFIGMNQHVL DNSNLMPFSC DTFLGPEFPG 60 NLEDNFPSLL HHNVSLPIFQ AQNEIHHGKK RKTLDLPQTS SANSTPAVSE SGTASKIIKH 120 SSGRGKRVKN NVTEEEKAKE VVHVRARRGQ ATDSHSLAER VRRGKINEKL RCLQNIVPGC 180 YKTMGMAVML DEIINYVQSL QHQVEFLSLK LTAASTFYDF NSETDALETM QRARASEAKE 240 LGKYKREGYG GVSCFQPTWP L |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G73830.1 | 1e-65 | bHLH family protein | ||||




