PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX82886.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 487aa MW: 51571.4 Da PI: 6.7167

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX82886.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.8	6.9e-12	255	300	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq RDX82886.1 255 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 300 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MQPCSREMQG INSLLNSPQI SLQDLHTTNQ IQNSHMNHQQ QQLSHATPHF DPTSHDDFLE 60 QMLSSCAWPD LNPNKPLWDP NPPNSDETTP SNNDNNVVFP YDEQTSLASK FRNHQISAST 120 TKNAAALMLH QQLLMSRAPD SGLLHMPLSL PGNDVVDASS FKSPNPVPHC YTGGEASVQA 180 LYNGFAGSLH GAVQASNQTQ HFQQPQGSSN PMQGQNFGAA AGVTNQAPAS GATGGTPAQP 240 RQRVRARRGQ ATDPHSIAER LRRERIAERM KALQELVPNA NKTDKASMLD EIIDYVKFLQ 300 LQVKVRFPRF TLVLGSKYGL VVLSMSRLGG AAAVAPLVAD MSSEGGGDCI QANGNSNGGA 360 PNSNNNQTTA STSNDSLTMT EHQVAKLMEE DMGSAMQYLQ GKGLCLMPIS LATAISTATC 420 HTRNPLINAA SGSGQIPTNA AAGTHANPTV ASNADGPSSP SMSVLTVQSA VVGNDGAVKD 480 AASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MQPCSREMQG INSLLNSPQI SLQDLHTTNQ IQNSHMNHQQ QQLSHATPHF DPTSHDDFLE  60
QMLSSCAWPD LNPNKPLWDP NPPNSDETTP SNNDNNVVFP YDEQTSLASK FRNHQISAST  120
TKNAAALMLH QQLLMSRAPD SGLLHMPLSL PGNDVVDASS FKSPNPVPHC YTGGEASVQA  180
LYNGFAGSLH GAVQASNQTQ HFQQPQGSSN PMQGQNFGAA AGVTNQAPAS GATGGTPAQP  240
RQRVRARRGQ ATDPHSIAER LRRERIAERM KALQELVPNA NKTDKASMLD EIIDYVKFLQ  300
LQVKVRFPRF TLVLGSKYGL VVLSMSRLGG AAAVAPLVAD MSSEGGGDCI QANGNSNGGA  360
PNSNNNQTTA STSNDSLTMT EHQVAKLMEE DMGSAMQYLQ GKGLCLMPIS LATAISTATC  420
HTRNPLINAA SGSGQIPTNA AAGTHANPTV ASNADGPSSP SMSVLTVQSA VVGNDGAVKD  480
AASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	260	265	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	3e-55	bHLH family protein