PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX83176.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 439aa MW: 50298.1 Da PI: 8.3102

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX83176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	172	195	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C Cg+ F +++ L++H + H RDX83176.1 172 YRCRVCGRKFHTNEKLVNHFKQlH 195 9******************98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MYEAKVEEHN VIGLARYHCT RRSPNVHESI TQLALRTVMR VHFSLTNANC GGEATSWQTY 60 GALRYCHFGS EGGKNLGSEG GKNPKLKPNE KPNRVGLFWD LDNKPPNSIP PYEVANKLRV 120 AASSFGVVRY MVAYANSHTF SHVPQCVREK RKERELLHRL ENKGVIKPNQ PYRCRVCGRK 180 FHTNEKLVNH FKQLHEREHE KRMKQIESAR GSRRVNLVAK YSMKMEKYKK AASAILTPKV 240 GYGLADELKQ AGFWVQTVLD KPQAADRALR SHMVDIMDHR RVECVVLVSD DTDFVDVIKE 300 AKLRCLKTVV IGDIDEGVLK RTADASFSWE EILMGKAKKQ AVSVVKNWKD RDILKRLEWT 360 YNPDVDEKKI NLDDTVTEAS EDDDIEDICD EVDDDYKDDR GSWWELDSDN DVTNGQPGKL 420 SDLSVKRESE ITMKTKVDF

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MYEAKVEEHN VIGLARYHCT RRSPNVHESI TQLALRTVMR VHFSLTNANC GGEATSWQTY  60
GALRYCHFGS EGGKNLGSEG GKNPKLKPNE KPNRVGLFWD LDNKPPNSIP PYEVANKLRV  120
AASSFGVVRY MVAYANSHTF SHVPQCVREK RKERELLHRL ENKGVIKPNQ PYRCRVCGRK  180
FHTNEKLVNH FKQLHEREHE KRMKQIESAR GSRRVNLVAK YSMKMEKYKK AASAILTPKV  240
GYGLADELKQ AGFWVQTVLD KPQAADRALR SHMVDIMDHR RVECVVLVSD DTDFVDVIKE  300
AKLRCLKTVV IGDIDEGVLK RTADASFSWE EILMGKAKKQ AVSVVKNWKD RDILKRLEWT  360
YNPDVDEKKI NLDDTVTEAS EDDDIEDICD EVDDDYKDDR GSWWELDSDN DVTNGQPGKL  420
SDLSVKRESE ITMKTKVDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12240.1	1e-128	C2H2 family protein