PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX83769.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family YABBY
Protein Properties Length: 232aa    MW: 26021.6 Da    PI: 6.7604
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX83769.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY171.26.8e-5361772165
       YABBY   2 dvfssseqvCyvqCnfCntil................avsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveee 80 
                 ++f+ +eq+CyvqC++C+til                +vsvP +sl++vvtvrCGhCtsllsvn++kas    +lla+  h        +  +++++e+
  RDX83769.1   6 HLFDLPEQICYVQCGYCTTILmvmsslelhavlkvdvVVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASfvpfHLLASLTH--------VEPKEGNSED 96 
                 7899****************84444444444334333479**************************998555566666665........3333333333 PP

       YABBY  81 nlksnvekeesastsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165
                   +++  +++++  +      s+ e+e+v+++ + v++PPekrqr Psaynrfikeei+r+ka+nP+++h+eafs+aaknWa fP+
  RDX83769.1  97 GANKTLNNYNASIMT-----YSDCEEENVTQMTNvVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPNMAHKEAFSTAAKNWANFPP 177
                 333333333222222.....23444555555555499************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MSTLNHLFDL PEQICYVQCG YCTTILMVMS SLELHAVLKV DVVVSVPCSS LSMVVTVRCG  60
HCTSLLSVNM MKASFVPFHL LASLTHVEPK EGNSEDGANK TLNNYNASIM TYSDCEEENV  120
TQMTNVVNKP PEKRQRTPSA YNRFIKEEIK RLKAENPNMA HKEAFSTAAK NWANFPPSQC  180
KGDADSCNRT EQLVDLDSNE EPRDAIQVNK EGQGFRGRKV PRNSIWARTP FE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23420.12e-74YABBY family protein