PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX84240.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 247aa MW: 28533.1 Da PI: 5.9737

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX84240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.4	4.4e-10	22	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd +lv++v+ +G g ++R++k+c++rw++yl RDX84240.1 22 KGPWSVEEDTILVNYVATHGDG----------LKRSGKSCRLRWLNYL 59 79****************99..........68999*******97 PP
2	Myb_DNA-binding	46.7	7.5e-15	65	108	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E+ ++d++ ++G++ W++Iar ++ gRt++++k++w++ RDX84240.1 65 RGNITLQEQITILDLHSRWGNR-WSKIARQLP-GRTDNEIKNYWRT 108 7899****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MDVKVKKARS IEEVQQSEDI KKGPWSVEED TILVNYVATH GDGLKRSGKS CRLRWLNYLR 60 PDVRRGNITL QEQITILDLH SRWGNRWSKI ARQLPGRTDN EIKNYWRTRV IKQARNLNCD 120 VDSKQFKDAL RYVWMPRLME RIQPPPTESL DPSQSHPNLS APALQHGSAS TALDSSASEL 180 QPRLDSEHLG YNVSGVCQSF NDQIFEQGNS TFPLGDGDLM ETLWDDEHIW LMRQLCDDLE 240 IKDNFLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47190.1	2e-69	MYB family protein