PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX84376.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 292aa MW: 31815.1 Da PI: 9.5658

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX84376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.5	8.3e-20	5	50	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G ++W++I++ ++ gR++k+c++rw + RDX84376.1 5 KGPWSPEEDEALQKLVEKHGARNWSLISKSIP-GRSGKSCRLRWCNQ 50 79****************************.*********985 PP
2	Myb_DNA-binding	56.3	7.2e-18	59	101	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ +v+a++++G++ W+tIar ++ gRt++ +k++w++ RDX84376.1 59 AFTPEEDDTIVRAHARFGNK-WATIARLLQ-GRTDNAIKNHWNST 101 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MDRIKGPWSP EEDEALQKLV EKHGARNWSL ISKSIPGRSG KSCRLRWCNQ LSPQVEHRAF 60 TPEEDDTIVR AHARFGNKWA TIARLLQGRT DNAIKNHWNS TLKRKCSSTM IDDLQPLKRS 120 MSAGAAIPVS TGLYMNPPTP GSPSGSDVSE SSVPVASPSH VYRPVPRTGG VLPPVETSSS 180 SKSNDPPTSL SLSLPGADSS EVSNRTTEPI HPSPPPNTIP LLPMMTPPAA VPPLKPTGLG 240 AFNLSAEFLG VMQEMIRNEV RSYMERQNGM CFQDDGFRNA SVKRIGISRI DS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	8e-84	MYB family protein