PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX84424.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 288aa    MW: 31908.5 Da    PI: 9.0845
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX84424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.19.9e-232169149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+ +n+sn qvtfskRr g++KKA+EL++LC+a+va+++fs+  k++ +
  RDX84424.1 21 KKMSNESNLQVTFSKRRSGLFKKASELCTLCGADVALVVFSPGEKVFSF 69
                5689***************************************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSHSEMSSAK KSRGRQKIEM KKMSNESNLQ VTFSKRRSGL FKKASELCTL CGADVALVVF  60
SPGEKVFSFG HPNVDAVIDR YMARAPPPNS GTMQFIEAHR IANVNELNAQ LTQINNQLDA  120
ERKRGEELDR LKKAAQAQLW WARPIDEMTK PQLDQYKAAM EELKKHVARL ADRTILQSAV  180
NPPQFYPGAS SSSNIAHQPQ PQPPPQPLPQ SLPPLPPQVF PPQPQSLTPL PSQLFPPQLI  240
QPSMLQNYMF VDGTLMNHHG FNDMGMGGFG PAGDKVSTEL GSDILDMS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-64M-type_MADS family protein