PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX84930.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 110aa    MW: 12413.2 Da    PI: 6.7957
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX84930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF435.7e-14347549
                SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                n+ n  v f k r g++KKA+ L +LC+++ avi+fs+ ++l+ +
  RDX84930.1  3 NEWNLRVMFLKHRIGVFKKASSLATLCGVDLAVIVFSPANRLFSF 47
                6778899***********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MGNEWNLRVM FLKHRIGVFK KASSLATLCG VDLAVIVFSP ANRLFSFGSP SVHSIIQRYT  60
EQAPPPLLRF DLNEAHYIPD ERELHAHLDY LGTEPFAEGY RGSLMVGHTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-21M-type_MADS family protein