PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX85090.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 477aa MW: 54137.8 Da PI: 6.6724

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX85090.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.3	4.2e-14	29	73	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + + ++G+++W+ Ia+++ +t qc+ rw++yl RDX85090.1 29 TWTQEEDDILREQIGLHGTENWAIIASKFK-DKTTRQCRRRWYTYL 73 6**************************9.***********97 PP
2	Myb_DNA-binding	43.6	6.6e-14	79	122	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + RDX85090.1 79 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 122 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MQDMKQQQQQ KQKQPVNEES KKKERHIVTW TQEEDDILRE QIGLHGTENW AIIASKFKDK 60 TTRQCRRRWY TYLNSDFKKG GWSPEEDMLL CEAQKIFGNR WTEIAKVVSG RTDNAVKNRF 120 STLCKKRAKY EALAKENNTS YINSNNKRIF LQHGCDTEVA SESAVAIKKM RRSHIPDAAE 180 KINFGDRSHK QNGIPINQQT RAPFAVLAQN SCNVNLPDQH HVCNLKFSDY AQNNKIQGTF 240 LKRDDPKISA LMQQAELLSS LAQKVDAENM DQSLENAWKV LQEFLNRTKE SDLPRYKIPD 300 LQLVDLKDLL EDLKSSSEEI QPCWRQMELY EDSPGSSEYS TGSTLMPHSA SENLEHSLHQ 360 DIGTELNMQI GDPKGVRGCD QGVLSSATLD QDLFPSCEEQ INNDGIVSAL SSLSEFSSPL 420 QVTPLFRSLA AGIPSPQFSE RKELPYENTR NGVSVAQPKC QPLTTATLQK SPLNMNL

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MQDMKQQQQQ KQKQPVNEES KKKERHIVTW TQEEDDILRE QIGLHGTENW AIIASKFKDK  60
TTRQCRRRWY TYLNSDFKKG GWSPEEDMLL CEAQKIFGNR WTEIAKVVSG RTDNAVKNRF  120
STLCKKRAKY EALAKENNTS YINSNNKRIF LQHGCDTEVA SESAVAIKKM RRSHIPDAAE  180
KINFGDRSHK QNGIPINQQT RAPFAVLAQN SCNVNLPDQH HVCNLKFSDY AQNNKIQGTF  240
LKRDDPKISA LMQQAELLSS LAQKVDAENM DQSLENAWKV LQEFLNRTKE SDLPRYKIPD  300
LQLVDLKDLL EDLKSSSEEI QPCWRQMELY EDSPGSSEYS TGSTLMPHSA SENLEHSLHQ  360
DIGTELNMQI GDPKGVRGCD QGVLSSATLD QDLFPSCEEQ INNDGIVSAL SSLSEFSSPL  420
QVTPLFRSLA AGIPSPQFSE RKELPYENTR NGVSVAQPKC QPLTTATLQK SPLNMNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	1e-150	MYB family protein