PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX85115.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SBP

Protein Properties

Length: 1029aa MW: 114235 Da PI: 7.9083

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX85115.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129	1.8e-40	83	160	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCe+hska+++l+++++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ RDX85115.1 83 MCQVDNCREDLSKAKDYHRRHKVCEAHSKASKALLANQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 160 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1029 aa Download sequence
MEKVATPPIL MHRKRDLSYG VVSPSESWKW DWDSVRFAGK PPPSSSNDDV VFEEESAPLQ 60 LNLGGRVNKR VRSGSPGTAS YPMCQVDNCR EDLSKAKDYH RRHKVCEAHS KASKALLANQ 120 MQRFCQQCSR FHPLSEFDEG KRSCRRRLAG HNRRRRKTQP EDVTSSTPAP AAANLEIFNL 180 LTAIAGASQG KFEERRSQVP DREQLVQILN RIPLPADLAT KLLDAGNVNG KKDHVQLQTP 240 SSYHRHGHDQ RNDTTPSAPL TMDLLAVLST TLSGSAPDAI ASPSQNRSCS SDGGSDKFRN 300 SADQTIRQQF FSVGGERSSS SSQSPVEDSD CQEDVRVNLP LQLFSSSPED DSLPKLASSR 360 KYFSSDSSNP ADEMSPSSSP PVVEMQFDLQ GGVRGLKPES ISSGRGVNAN KEASQSHSCN 420 ISLDLFKGSN NRVQQPSSHQ SVPFQAGYTS SGSDHSPPSL NSDAQDRTGR IMFKLFDKHP 480 SHFPGTLRAQ IYSWLSNRPS DMESYIRPGC VVLSLYASMS SAAWEKLEEN FLQQVHSLIQ 540 NSDSDFWRNG RFLVHSGSQL ASHKDGKIRL CKSWRTWKSP ELISVSPLAI VSGQETSISL 600 KGRNLSTPGT KIHCTGTGSY TSAEVIGSVY PGVMYDKIKL GGFKVQDVSP GVLGRCFIEV 660 ENGFKGNSFP VIIADETICK ELRPLESEFD EEEIICDAIS EEHEHHFGRP RSREEALHFL 720 NELGWLFQRE RFSYVHEVPY YSLDRFKFVL TFAVERNCCM LVKTLLDVLV DKHLQGEWLS 780 SGSVEMLNAT QLLNRAVKRK YKGMVDLLIH YTIPSKYSTS RKYVFPPNLE GPGGITPLHL 840 AACTSGSESV VDSLTSDPQE IGLKCWESLV DANGQTPHAY AMMRNNDSYN ALVARKLAER 900 RGEMSLTIES EIEQLSLRVE LKQKQSNLVK RGQSSCSKCA IAEINYNRGV PGSQGLLHRP 960 FIYSMLAVAA VCVCVCLFFR GRPFVGSVAP FSWENLDYGT ISVFCLFRDC LGPSVCYILP 1020 LRVGTCKTF

Sequence ? help Back to Top

Protein Sequence Length: 1029 aa Download sequence

MEKVATPPIL MHRKRDLSYG VVSPSESWKW DWDSVRFAGK PPPSSSNDDV VFEEESAPLQ  60
LNLGGRVNKR VRSGSPGTAS YPMCQVDNCR EDLSKAKDYH RRHKVCEAHS KASKALLANQ  120
MQRFCQQCSR FHPLSEFDEG KRSCRRRLAG HNRRRRKTQP EDVTSSTPAP AAANLEIFNL  180
LTAIAGASQG KFEERRSQVP DREQLVQILN RIPLPADLAT KLLDAGNVNG KKDHVQLQTP  240
SSYHRHGHDQ RNDTTPSAPL TMDLLAVLST TLSGSAPDAI ASPSQNRSCS SDGGSDKFRN  300
SADQTIRQQF FSVGGERSSS SSQSPVEDSD CQEDVRVNLP LQLFSSSPED DSLPKLASSR  360
KYFSSDSSNP ADEMSPSSSP PVVEMQFDLQ GGVRGLKPES ISSGRGVNAN KEASQSHSCN  420
ISLDLFKGSN NRVQQPSSHQ SVPFQAGYTS SGSDHSPPSL NSDAQDRTGR IMFKLFDKHP  480
SHFPGTLRAQ IYSWLSNRPS DMESYIRPGC VVLSLYASMS SAAWEKLEEN FLQQVHSLIQ  540
NSDSDFWRNG RFLVHSGSQL ASHKDGKIRL CKSWRTWKSP ELISVSPLAI VSGQETSISL  600
KGRNLSTPGT KIHCTGTGSY TSAEVIGSVY PGVMYDKIKL GGFKVQDVSP GVLGRCFIEV  660
ENGFKGNSFP VIIADETICK ELRPLESEFD EEEIICDAIS EEHEHHFGRP RSREEALHFL  720
NELGWLFQRE RFSYVHEVPY YSLDRFKFVL TFAVERNCCM LVKTLLDVLV DKHLQGEWLS  780
SGSVEMLNAT QLLNRAVKRK YKGMVDLLIH YTIPSKYSTS RKYVFPPNLE GPGGITPLHL  840
AACTSGSESV VDSLTSDPQE IGLKCWESLV DANGQTPHAY AMMRNNDSYN ALVARKLAER  900
RGEMSLTIES EIEQLSLRVE LKQKQSNLVK RGQSSCSKCA IAEINYNRGV PGSQGLLHRP  960
FIYSMLAVAA VCVCVCLFFR GRPFVGSVAP FSWENLDYGT ISVFCLFRDC LGPSVCYILP  1020
LRVGTCKTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein