PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX85193.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 235aa MW: 26037.8 Da PI: 8.6307

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX85193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.8e-19	34	79	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v+++G+++W++I+r++ gR++k+c++rw + RDX85193.1 34 KGPWSAEEDRILTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 79 79***************************9.*********985 PP
2	Myb_DNA-binding	57.4	3.4e-18	88	130	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++++Ed+ ++ a++q+G++ W+tIar ++ gRt++ +k++w++ RDX85193.1 88 PFSAQEDQTIIAAHAQYGNR-WATIARLLP-GRTDNAVKNHWNST 130 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MDAMNRSSSS TSSSSDSCSS ESNHRNPNKP DRIKGPWSAE EDRILTRLVE RYGPRNWSLI 60 SRYIKGRSGK SCRLRWCNQL SPTVEHRPFS AQEDQTIIAA HAQYGNRWAT IARLLPGRTD 120 NAVKNHWNST LKRRAKDGVA ITNAIANQGG TSSSAPEDDP LTVLTLATPG IDNAAVADHR 180 PSPESAPAGF WDIMRDVIAR EVREYVSSNF SDNSSGKLFC TFILPYWALE SDQGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	2e-62	MYB family protein