PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX85588.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HB-other

Protein Properties

Length: 424aa MW: 47606 Da PI: 6.7861

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX85588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.4	4.2e-07	62	123	6	55
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRake 55 +ft+ ++ e+e+ ++ n p ++ + LA+k ++ +qV +WFqN+R+ RDX85588.1 62 RFTQAEVAEMEAILQEhnNAMPARDVLTTLAEKFsespdrkgkiTVQMKQVWNWFQNKRYAI 123 69**********9666999*****************99999**********865 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MSVLPFSQFF SALPNSTKAF NFKLLLNPNT PFSFQHKLSF CFVFWFSFIM GRPPSNGGPA 60 FRFTQAEVAE MEAILQEHNN AMPARDVLTT LAEKFSESPD RKGKITVQMK QVWNWFQNKR 120 YAIRAKSSKT PGKLNITPMP RDDSTPVRSM PQQPTAAPIP AASASVPTAV KATPENSVME 180 FEAKSGRDGA WYDVATFLSH RYLETSDPEV LVRFAGFGPE EDEWINIRKH VRPRSLPCES 240 SECVVVIPGD LILCFQEGKE QALYFDAHVL DAQRRRHDVR GCRCRFLVRY DHDQSEEIVP 300 LRKICRRPET DYRLQQLHAV NEAAPVDQQK SSMDPAANVN AMRTTTETVP KQLITANIHM 360 ETPVIQTNVP LPPQSMDVDQ AKAETSTDVQ AGNSIIPQGN AFTNIITSSS VPEVSSQTQN 420 MVED

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MSVLPFSQFF SALPNSTKAF NFKLLLNPNT PFSFQHKLSF CFVFWFSFIM GRPPSNGGPA  60
FRFTQAEVAE MEAILQEHNN AMPARDVLTT LAEKFSESPD RKGKITVQMK QVWNWFQNKR  120
YAIRAKSSKT PGKLNITPMP RDDSTPVRSM PQQPTAAPIP AASASVPTAV KATPENSVME  180
FEAKSGRDGA WYDVATFLSH RYLETSDPEV LVRFAGFGPE EDEWINIRKH VRPRSLPCES  240
SECVVVIPGD LILCFQEGKE QALYFDAHVL DAQRRRHDVR GCRCRFLVRY DHDQSEEIVP  300
LRKICRRPET DYRLQQLHAV NEAAPVDQQK SSMDPAANVN AMRTTTETVP KQLITANIHM  360
ETPVIQTNVP LPPQSMDVDQ AKAETSTDVQ AGNSIIPQGN AFTNIITSSS VPEVSSQTQN  420
MVED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-129	HB-other family protein