PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX85697.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

CO-like

Protein Properties

Length: 370aa MW: 40216.1 Da PI: 6.6041

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX85697.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.4	5.2e-07	20	60	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + C+ ++ + lfC+ ++ +lC C +++H H+ RDX85697.1 20 KPCDSCKLASAALFCRPDSAFLCIACDSKIHCAnklasrHE 60 68****99*******************5545666666 PP
2	zf-B_box	26.2	1.6e-08	62	106	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+ +e+ ++ C+ + lC +C + +H+ H++v RDX85697.1 62 VWMCEVCEQAPAAVTCKADAAALCVTCDSDIHSAnplarrHERVA 106 689*****************************6688888898875 PP
3	CCT	69.7	7.4e-24	298	341	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ RDX85697.1 298 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 341 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGIERGGLKG FRSGWTVPPK PCDSCKLASA ALFCRPDSAF LCIACDSKIH CANKLASRHE 60 RVWMCEVCEQ APAAVTCKAD AAALCVTCDS DIHSANPLAR RHERVAVEPF FDSAESIVKA 120 TNAASFGFIV PSDDGTAASD AFGPDDADAA AWLIPNPNFG SKLIDAPDIK SREMFFSEMD 180 PFLDFDYSNS FQNNNSTTND SVVPVQSKPS LAPPLMNHHH QSEGCFDIDF CRSKLSSFNY 240 PSQSLSQSVS SSSMDVGVVP DGNTVSDMSY SLGRNSSDSS GIVVSGGSGA TQLCGMDREA 300 RVLRYREKRK NRKFEKTIRY ASRKAYAETR PRIKGRFAKR TEIDSDVDRL YSPAAAALML 360 DTPYGVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGIERGGLKG FRSGWTVPPK PCDSCKLASA ALFCRPDSAF LCIACDSKIH CANKLASRHE  60
RVWMCEVCEQ APAAVTCKAD AAALCVTCDS DIHSANPLAR RHERVAVEPF FDSAESIVKA  120
TNAASFGFIV PSDDGTAASD AFGPDDADAA AWLIPNPNFG SKLIDAPDIK SREMFFSEMD  180
PFLDFDYSNS FQNNNSTTND SVVPVQSKPS LAPPLMNHHH QSEGCFDIDF CRSKLSSFNY  240
PSQSLSQSVS SSSMDVGVVP DGNTVSDMSY SLGRNSSDSS GIVVSGGSGA TQLCGMDREA  300
RVLRYREKRK NRKFEKTIRY ASRKAYAETR PRIKGRFAKR TEIDSDVDRL YSPAAAALML  360
DTPYGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-110	CO-like family protein