PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86320.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 388aa MW: 42984.1 Da PI: 9.7047

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86320.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	90.2	4.5e-28	48	124	3	79
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesss 79 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WLl++ k i++l+ +++++ + ++++ RDX86320.1 48 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKFDIDKLPPLQFPQGFAQFHHQQT 124 79*************************************************************77777333222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MASSREGYQA KQEGETINID KFPKASSTSR QWSAFRNPRI VRVSRSFGGK DRHSKVCTIR 60 GLRDRRIRLS VPTAIQLYDL QDKLGLSQPS KVIDWLLEAT KFDIDKLPPL QFPQGFAQFH 120 HQQTLLPFHG SSASQLSLGP FCDASSTLRD GGIQNLMTKS RYWDNMDSIS RLKGKEAEKG 180 KWIKTHEQEN QDDVVGGYNS LQVSTQRLFP MGSSNTTTHS LLPGLLNNTM SYNSYNSEPS 240 SLSLSQFGSN GLFPSQQVDP NPSTGNGVQY PSSGSQLLFG SSSATPSIFT TYAPFMTPSL 300 DNDPRQFNHI QFMNPGSQIL PHPLIPSLHS FNSHVRPFPA PPFSSKLLDS DNNRGQQDKA 360 TLTLLTNHSG YKCFIGGTGK EIGNGRYC

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MASSREGYQA KQEGETINID KFPKASSTSR QWSAFRNPRI VRVSRSFGGK DRHSKVCTIR  60
GLRDRRIRLS VPTAIQLYDL QDKLGLSQPS KVIDWLLEAT KFDIDKLPPL QFPQGFAQFH  120
HQQTLLPFHG SSASQLSLGP FCDASSTLRD GGIQNLMTKS RYWDNMDSIS RLKGKEAEKG  180
KWIKTHEQEN QDDVVGGYNS LQVSTQRLFP MGSSNTTTHS LLPGLLNNTM SYNSYNSEPS  240
SLSLSQFGSN GLFPSQQVDP NPSTGNGVQY PSSGSQLLFG SSSATPSIFT TYAPFMTPSL  300
DNDPRQFNHI QFMNPGSQIL PHPLIPSLHS FNSHVRPFPA PPFSSKLLDS DNNRGQQDKA  360
TLTLLTNHSG YKCFIGGTGK EIGNGRYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-53	TCP family protein