PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86399.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 162aa MW: 18892.8 Da PI: 10.3022

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	83.8	1.1e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n s rqvtfskRr+g++KKA+ELS+LCda++a+i+fs t kl+ey+s RDX86399.1 9 KKIDNISSRQVTFSKRRKGLFKKAQELSTLCDADIALIVFSATSKLFEYAS 59 68***********************************************86 PP
2	K-box	40.2	1.5e-14	88	156	17	85
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 + + L+k++e re+R+l GedL+ L+l+eLq++e+ L+++l+++ + K+e ++++i++l++k++ RDX86399.1 88 ESDSNDILRKKVEDKNRELRQLNGEDLQGLTLQELQKVEELLKRGLSNVSKVKDEKVMQEISTLKRKNN 156 455557799*********************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MTRKRIQIKK IDNISSRQVT FSKRRKGLFK KAQELSTLCD ADIALIVFSA TSKLFEYASS 60 SMQQVIERRD RHSAMHRLDR PTIEMQIESD SNDILRKKVE DKNRELRQLN GEDLQGLTLQ 120 ELQKVEELLK RGLSNVSKVK DEKVMQEIST LKRKNNCSLL EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	2e-49	MIKC_MADS family protein