PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86405.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 394aa MW: 44634.1 Da PI: 6.593

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.9e-17	113	161	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l+++++++G+g +W + +++ g++R++k+c++rw++yl RDX86405.1 113 KGPWSPEEDKKLKEYIEKHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 161 79*********************************************97 PP
2	Myb_DNA-binding	37.1	7.3e-12	168	210	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ RDX86405.1 168 GDFSDEEDRIICSLFVNIGSR-WSIIAAQLP-GRTDNDIKNYWNT 210 679****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MKRLMVYELH EGSFLGVGLY SYVSEARRGS PSCCVVFLSV LQTLDASSLD EEEENERALA 60 RNGSLIYKAQ ALPTKTSFRL ESESLDPQKQ IEIAERDREM GRAPCCDKAS VKKGPWSPEE 120 DKKLKEYIEK HGTGGNWIAL PQKAGLKRCG KSCRLRWLNY LRPNIKHGDF SDEEDRIICS 180 LFVNIGSRWS IIAAQLPGRT DNDIKNYWNT KLKKKLMGLL PLSHHRKQPS FQSSSLQNPP 240 PSPSSHQLYG EYCTYTPMTP SSFTGMQPLS LPSSNYATTS STTTTSVSHP FYQSQDSMAS 300 MQCYYPMRDS MVMFGSEGSC SSSDGSCTHG REIKQEETGF HSYNDNLMLS YNNISQTLTP 360 LDYDMEDIKQ LISSSFNNVD ENKTEEEKAM YYYY

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MKRLMVYELH EGSFLGVGLY SYVSEARRGS PSCCVVFLSV LQTLDASSLD EEEENERALA  60
RNGSLIYKAQ ALPTKTSFRL ESESLDPQKQ IEIAERDREM GRAPCCDKAS VKKGPWSPEE  120
DKKLKEYIEK HGTGGNWIAL PQKAGLKRCG KSCRLRWLNY LRPNIKHGDF SDEEDRIICS  180
LFVNIGSRWS IIAAQLPGRT DNDIKNYWNT KLKKKLMGLL PLSHHRKQPS FQSSSLQNPP  240
PSPSSHQLYG EYCTYTPMTP SSFTGMQPLS LPSSNYATTS STTTTSVSHP FYQSQDSMAS  300
MQCYYPMRDS MVMFGSEGSC SSSDGSCTHG REIKQEETGF HSYNDNLMLS YNNISQTLTP  360
LDYDMEDIKQ LISSSFNNVD ENKTEEEKAM YYYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	4e-72	MYB family protein