PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86611.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 350aa MW: 37946.6 Da PI: 6.4248

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	36	81	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + RDX86611.1 36 KGPWSPEEDAILSRLVSKFGARNWSLIARGIS-GRSGKSCRLRWCNQ 81 79****************************.*********985 PP
2	Myb_DNA-binding	58.1	2e-18	88	132	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++v a++ +G++ W++Iar ++ gRt++ +k++w++ RDX86611.1 88 RKPFTDEEDRIIVAAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 132 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MEQEETAATA IDADGSGDEG LLGLGGGGGG GRDRVKGPWS PEEDAILSRL VSKFGARNWS 60 LIARGISGRS GKSCRLRWCN QLDPSVKRKP FTDEEDRIIV AAHAIHGNKW AAIARLLPGR 120 TDNAIKNHWN STLRRRGVEH DKIKLESGNF VEDVSLEKAK ASSEDTLSCG DVSLKSSEGR 180 DVSSVEIMDD KFDDKAQTED QLHHEIRDPP TLFRPVARVS AFSVYHSFDG IQPSTSIQRP 240 VPIQGPILQP SKPDMEFCKM IEGICGDQSV PHQCGHGCCA APNGRKSKSS LLGPEFIELS 300 EPPSFPNFEL AAIATDISNL AWLKSGLENS SVKMMGSTSG RVIPNGSQKF

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MEQEETAATA IDADGSGDEG LLGLGGGGGG GRDRVKGPWS PEEDAILSRL VSKFGARNWS  60
LIARGISGRS GKSCRLRWCN QLDPSVKRKP FTDEEDRIIV AAHAIHGNKW AAIARLLPGR  120
TDNAIKNHWN STLRRRGVEH DKIKLESGNF VEDVSLEKAK ASSEDTLSCG DVSLKSSEGR  180
DVSSVEIMDD KFDDKAQTED QLHHEIRDPP TLFRPVARVS AFSVYHSFDG IQPSTSIQRP  240
VPIQGPILQP SKPDMEFCKM IEGICGDQSV PHQCGHGCCA APNGRKSKSS LLGPEFIELS  300
EPPSFPNFEL AAIATDISNL AWLKSGLENS SVKMMGSTSG RVIPNGSQKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-107	MYB family protein