PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86623.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 213aa MW: 24205.3 Da PI: 6.5336

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	100.4	6.9e-32	25	75	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss RDX86623.1 25 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSS 75 79***********************************************96 PP
2	K-box	69.1	1.4e-23	75	142	33	100
K-box 33 reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ R+llGedL +++ eL+qLe+qLe++l++iRs+K++++l+q+ +l ++e +l e+n+ Lr+klee RDX86623.1 75 STSRNLLGEDLAQMNTTELEQLENQLESALRNIRSTKTQFMLDQLADLHHRETMLVETNNVLRSKLEE 142 688**************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
EREFPERERE RERNKKMGRG RVELKRIENK INRQVTFAKR RNGLLKKAYE LSVLCDAEVA 60 LIIFSNRGKL YEFSSTSRNL LGEDLAQMNT TELEQLENQL ESALRNIRST KTQFMLDQLA 120 DLHHRETMLV ETNNVLRSKL EETTNSQIPV SMGLEAGGSN IHYTNFLPQS EGFFQPVGVN 180 PNLQIGYNPT GPDDADVGAS SLSMHGFASG WML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	2e-60	MIKC_MADS family protein