PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86710.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 289aa MW: 32759.1 Da PI: 7.4183

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed+ l ++++++G g+W+ +++ g++R++k+c++rw++yl RDX86710.1 14 RGAWTAQEDKTLTKYITLHGVGRWRNLPQKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	52.3	1.3e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+v+++k+lG++ W++Ia +++ gRt++++k++w++ RDX86710.1 67 RGNISSDEEELIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 78999***************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MGRSPCCSKE GLNRGAWTAQ EDKTLTKYIT LHGVGRWRNL PQKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SSDEEELIVR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKRVKDGD 120 QTITTCSRRL SSQLPNENEN KTQNPMPHLG TPKLNSHVIR TKATKCSKVL ILNPLPQPSM 180 QLPNKSNGEV EVEEEGTLVD ALNNKMERGA YDNDILPFCG EEKEVSNDLL VDFNVGDICL 240 SDLLNSDLSN TYNLSCTEPI MLSDEHLNEW TQIDFADAFN NIHSFHFVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	3e-63	MYB family protein