PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX86809.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 302aa MW: 34640.2 Da PI: 6.6646

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX86809.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.3	7.4e-13	12	57	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W+ eEde l++ v+++G++ W++I ++ + Rt+k+c++rw + RDX86809.1 12 KGPWSSEEDEVLLRHVNKYGPREWSSIRSKGLLPRTGKSCRLRWVN 57 79***********************8876677********87 PP
2	Myb_DNA-binding	40.9	4.7e-13	68	108	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++T+eE+ +++ +++G++ W++Ia ++ gRt++++k++w RDX86809.1 68 KFTAEEERVVIELQARFGNK-WAKIATYLH-GRTDNDVKNFWS 108 79****************.*****.*********6 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MEGEFDRGCI KKGPWSSEED EVLLRHVNKY GPREWSSIRS KGLLPRTGKS CRLRWVNKLR 60 PNLKTGCKFT AEEERVVIEL QARFGNKWAK IATYLHGRTD NDVKNFWSSR RKRLERMLRR 120 PPTLKPQKNK GKTPLNQVQV EKVPPCSSNQ VEENLSYPTS YMGNTELFEM INLPDLIKPN 180 YQHWESDPLS AVEVDATPLH TVPSFESSSG YNFPPLPEPL MDFPLFPECQ DLVPEPFDPN 240 FIDGFEQKKC SECLCSSQKL GTSMPSLGLE GDSQSTSSNV LFKDFPSEIF EYFEHIPTSS 300 QQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	2e-58	MYB family protein