PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX87161.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 78aa    MW: 8936.53 Da    PI: 11.0471
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX87161.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.11.1e-281059251
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                ri+n++ rqvtfskRrng+lKKA ELS+LCdaev +++fsstgkly+y+s
  RDX87161.1 10 RIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGLMVFSSTGKLYDYAS 59
                8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MGRGKIAIRR IDNSTSRQVT FSKRRNGLLK KARELSILCD AEVGLMVFSS TGKLYDYAST  60
RYKAYKLIGC KALRFNIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14210.12e-34MIKC_MADS family protein