PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX87173.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 229aa MW: 25031.4 Da PI: 6.8472

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX87173.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	99.2	4.1e-31	2	103	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C++C+vlr++C+++C+l+p++ p++q +++ +v+k+FG++ ++++++++pe +r+++++sl++eA+ r+ +P++Gavg++++++++++q+++e+ RDX87173.1 2 SCNGCRVLRKGCSESCILRPCLqwidtPEAQGHATVFVAKFFGRADLMSFISNVPEPQRPALFQSLLFEACGRTVNPINGAVGLLWTGNWHVCQAAVET 100 6***********************************************************************************************999 PP DUF260 95 all 97 +l+ RDX87173.1 101 VLR 103 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MSCNGCRVLR KGCSESCILR PCLQWIDTPE AQGHATVFVA KFFGRADLMS FISNVPEPQR 60 PALFQSLLFE ACGRTVNPIN GAVGLLWTGN WHVCQAAVET VLRGGTLRPM PELLGLDAPA 120 DDASEGEVTC TDKWKVRDPN PNFRFPGSRS DKVASDCKRK RCDELAKFQT TADLNLRLTP 180 SFGCGHEIRR SGSPSMNSEE SGTTTACLES GIGDHYAADG DRKVLNLFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49940.1	4e-83	LBD family protein