PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX87427.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 492aa MW: 53914.8 Da PI: 5.2369

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX87427.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.6	1.4e-05	342	379	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L RDX87427.1 342 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 379 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MAEEFHAAIC GESWWNINST RSVFPLMSST CSVAAADAGN YSTWQSTDFV DLKGTRSCAE 60 ETNNLVSSDA SLSFLDAEKP QLSDSASGTG SILIDSTLQM MGFGMSSSTS SNWNQSLLGS 120 GFHSVLQEET GTAGGSSHNS QIQKDWSPKN FSSAGGNQEF SLDQQSLNSV VASTGLSCGF 180 PIVSASFDYP PTLIQSLYDP EPQPQPHNTV FTNPSMSYSS TANYGTCSNE LSPTWSKVSS 240 LMKPSMPKQQ LSGLHFSNNT SFWNASAEAL NDIRAGVFAS SQPQYQPPKF EEKPNCPNTL 300 LNKLKREESS DAASAAKKNS SEPAFKRQRI ETPSPLPTFK VRKEKLGDRI TALQQLVSPF 360 GKTDTASVLH EAIEYIKFLH DQVSVLTTPY MKNGAPIQHQ QDCENLKESE GPKQDLRSRG 420 LCLVPISSTF PVANETTVDF WTPTFGGALI GREEEGEEDT IGKEKIKAEE NKREKRRKEK 480 EVTLQRWTRK GE

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MAEEFHAAIC GESWWNINST RSVFPLMSST CSVAAADAGN YSTWQSTDFV DLKGTRSCAE  60
ETNNLVSSDA SLSFLDAEKP QLSDSASGTG SILIDSTLQM MGFGMSSSTS SNWNQSLLGS  120
GFHSVLQEET GTAGGSSHNS QIQKDWSPKN FSSAGGNQEF SLDQQSLNSV VASTGLSCGF  180
PIVSASFDYP PTLIQSLYDP EPQPQPHNTV FTNPSMSYSS TANYGTCSNE LSPTWSKVSS  240
LMKPSMPKQQ LSGLHFSNNT SFWNASAEAL NDIRAGVFAS SQPQYQPPKF EEKPNCPNTL  300
LNKLKREESS DAASAAKKNS SEPAFKRQRI ETPSPLPTFK VRKEKLGDRI TALQQLVSPF  360
GKTDTASVLH EAIEYIKFLH DQVSVLTTPY MKNGAPIQHQ QDCENLKESE GPKQDLRSRG  420
LCLVPISSTF PVANETTVDF WTPTFGGALI GREEEGEEDT IGKEKIKAEE NKREKRRKEK  480
EVTLQRWTRK GE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.1	1e-66	bHLH family protein