PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX87456.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 62aa    MW: 7005.3 Da    PI: 10.9056
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX87456.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.51.5e-27959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n   rqvtfskRr+g++KKA+ELS+LCdae+a+i+fs t kl+ey+s
  RDX87456.1  9 KKIDNINARQVTFSKRRKGLFKKAQELSTLCDAEIALIVFSATSKLFEYAS 59
                689**********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    
MARKKIPIKK IDNINARQVT FSKRRKGLFK KAQELSTLCD AEIALIVFSA TSKLFEYASS  60
SI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-22MIKC_MADS family protein