PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX87752.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

HD-ZIP

Protein Properties

Length: 207aa MW: 24353.6 Da PI: 7.1481

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX87752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.3	3e-19	52	106	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+eq+ Le+ F +++++ e++ +LA +lgL+ rqV vWFqNrR ++k+ RDX87752.1 52 KKRKLTAEQVSLLEQNFGNEHKLESERKDQLALELGLDPRQVAVWFQNRRCRWKN 106 56699************************************************95 PP
2	HD-ZIP_I/II	113.2	1.6e-36	52	142	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkr+l++eqv+lLE++F +e+kLe+erK +la eLgl+prqvavWFqnrR R+k+k+lE++y+ Lk+ +++ + e+++Le+ev +L+e+l RDX87752.1 52 KKRKLTAEQVSLLEQNFGNEHKLESERKDQLALELGLDPRQVAVWFQNRRCRWKNKKLEEEYSNLKNVHETTMLEKCHLEAEVLKLEEQLL 142 9**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MNHRPIIEDH MMLFSRLYPG AITQVTPQQG ENKPRRRRNK KNKGGENGAV TKKRKLTAEQ 60 VSLLEQNFGN EHKLESERKD QLALELGLDP RQVAVWFQNR RCRWKNKKLE EEYSNLKNVH 120 ETTMLEKCHL EAEVLKLEEQ LLEAKKEIQR LLERGERAPS NSSSSSMEVV NPPFLGEFKV 180 EEYDDSDVFY VPETHYINGM EWINLYI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	35	55	RRRRNKKNKGGENGAVTKKRK
2	36	56	RRRRNKKNKGGENGAVTKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	2e-52	HD-ZIP family protein