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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX88362.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 415aa MW: 47157.8 Da PI: 6.4531 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 23.4 | 1.5e-07 | 76 | 96 | 1 | 22 |
AP2 1 sgykGVrwdkkrgrWvAeIrdp 22
++++GVr++ +g+WvAeIr+p
RDX88362.1 76 CKFRGVRQRI-WGKWVAEIREP 96
79*****998.*********96 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 415 aa Download sequence |
MKKLYLNRPC RKRKSRKRRN GGSDSVEDTF EKWKEYNRQQ QLGIRENGME VIHKAPAKGS 60 RKWCMRSKGG PQNSDCKFRG VRQRIWGKWV AEIREPMYGP CARLNFPESS MEPLDSNESE 120 CDKKLPSASP DTLNGGDVAQ AVELEGNLHQ SHEEKPRFSK VGVFEETKEK PVFCCMADDS 180 IEELKDMTIG FEECKAKAFK NVKSEAAGES EGVERELEEV MKISGISEES NRLQMNTRDS 240 NSRLNYEQFN NTQTEASIAN KHTEEVISEI PGLCHSKCLQ ISHSQLPNEQ YRSEHFDEMK 300 TELKALECKL RANSIHYKNQ APIVGDSNHP SMQGIHLFGG GTVGPIENMS QVEALNNINA 360 NRNSLPSGHS RKLSDVSQHL HKIGGYFPEQ FADLEVGYDY SFLRPDYDFG LVEEQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G40340.1 | 8e-22 | ERF family protein | ||||




