PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88410.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

RAV

Protein Properties

Length: 412aa MW: 44750.5 Da PI: 9.8444

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	43.5	7.7e-14	74	122	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV + +grW A+I++ ++r++lg+f ++eAa+a++ a+++++g RDX88410.1 74 SKYKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEDEAARAYDIAAQRFRG 122 89**9888.8*****3.....5******99***********98 PP
2	B3	98.7	3.5e-31	210	314	1	96
EEEE-..-HHHHTT-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+ tpsdv+k++rlv+pk++ae+h + ++++ l +ed g++W+++++y+++s++yvltkGW++Fvk+++Lk+gD+v F+++ ++ RDX88410.1 210 FEKAVTPSDVGKLNRLVIPKQHAEKHfplqsvngvSATAAKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCFHRSTGPDK 308 89*************************9998886666799************************************************8766777 PP ..EEEE CS B3 91 elvvkv 96 +l++ + RDX88410.1 309 QLYIDW 314 777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MDAISCMDES TTTESLSISL SPTTSSKKAS TLSKKASPPL SNTLCRVGSG ASAIVDSDGG 60 GGSTEVESRK LPSSKYKGVV PQPNGRWGAQ IYEKHQRVWL GTFNEEDEAA RAYDIAAQRF 120 RGKDAVTNFK PLAGAGGSGE EDDDGEAEFL NAHSKSEIVD MLRKHTYNDE LEQSKRSRGV 180 VGRRRGGPSG GGSGTSISGA CAMKAREQLF EKAVTPSDVG KLNRLVIPKQ HAEKHFPLQS 240 VNGVSATAAK GVLLNFEDVG GKVWRFRYSY WNSSQSYVLT KGWSRFVKEK NLKAGDTVCF 300 HRSTGPDKQL YIDWKARNVS EVGLFGPVGP VVEPIQMVRL FGVNILKLPG SDSIANNNNA 360 SGSIPGCCNG KRREMELFSL ECSKKPKIIG AFFVTDERKK VQERRCSGKL QK

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MDAISCMDES TTTESLSISL SPTTSSKKAS TLSKKASPPL SNTLCRVGSG ASAIVDSDGG  60
GGSTEVESRK LPSSKYKGVV PQPNGRWGAQ IYEKHQRVWL GTFNEEDEAA RAYDIAAQRF  120
RGKDAVTNFK PLAGAGGSGE EDDDGEAEFL NAHSKSEIVD MLRKHTYNDE LEQSKRSRGV  180
VGRRRGGPSG GGSGTSISGA CAMKAREQLF EKAVTPSDVG KLNRLVIPKQ HAEKHFPLQS  240
VNGVSATAAK GVLLNFEDVG GKVWRFRYSY WNSSQSYVLT KGWSRFVKEK NLKAGDTVCF  300
HRSTGPDKQL YIDWKARNVS EVGLFGPVGP VVEPIQMVRL FGVNILKLPG SDSIANNNNA  360
SGSIPGCCNG KRREMELFSL ECSKKPKIIG AFFVTDERKK VQERRCSGKL QK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13260.1	1e-132	RAV family protein