PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX88550.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 175aa    MW: 20039.8 Da    PI: 8.6876
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX88550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.37.1e-202376457
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                + ++t++q+ +Le++F++n+++  e++ +LA++lg++ rqV +W+qN+Ra++k+
  RDX88550.1 23 KKRLTEDQVAILEKCFASNMKLEPEQKFHLANQLGVPPRQVAIWYQNKRARWKN 76
                5679************************************************95 PP
2HD-ZIP_I/II111.74.8e-3622113293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  +k+rl+++qv++LE++F ++ kLepe+K +la++Lg+ prqva+W+qn+RAR+k++ lE+d+ +L+++++++++e+++Lek+ve+L++elk+
   RDX88550.1  22 NKKRLTEDQVAILEKCFASNMKLEPEQKFHLANQLGVPPRQVAIWYQNKRARWKNQSLEVDHGVLQAKLENVMAEKKQLEKDVERLKAELKK 113
                  79***************9999********************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MGDFIFSFKT QEHAHQRAKH NNKKRLTEDQ VAILEKCFAS NMKLEPEQKF HLANQLGVPP  60
RQVAIWYQNK RARWKNQSLE VDHGVLQAKL ENVMAEKKQL EKDVERLKAE LKKAQEMLLI  120
AGNVKGADHK GGNSGVLDDA THHECWQSGE VMQVEELYAY FMGANYGSGL HEKRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.12e-39HD-ZIP family protein