PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX88552.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 744aa    MW: 83128.1 Da    PI: 6.3012
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX88552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.82.8e-1693146156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +rk +++t+eq++e+e++  ++++p++++r +L+k+lgL  rqVk+WFqNrR++ k
  RDX88552.1  93 KRKYHRHTAEQIREMEAY--ESPHPDEKQRLQLSKQLGLAPRQVKFWFQNRRTQIK 146
                 79999************6..9*******************************9877 PP
2START2239e-702624834206
                 HHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT CS
       START   4 eeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg 88 
                 ++a++e++k+a  +ep+Wv+s+    e++n+de++++f+ +++        +e++r++g+v+m+l++lv+++ld++ qW+e+++    ka+t++v+++ 
  RDX88552.1 262 NRATEEFIKMANMGEPLWVRSVetgrEILNYDEYVKEFAVENScterpkTFIEVSRETGLVFMDLPRLVQSFLDVN-QWKEMFPclisKAATVDVVCNR 359
                 7899**********************************998889****99**************************.********************99 PP

                 ......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHH CS
       START  89 ......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwl 180
                       ga+qlm+aelq+l+plvp R+++fvR++++l++++w+ivdvS+d  +++  ++s+v+++++pSg++ie+ksngh+kv+wveh +++++++h l
  RDX88552.1 360 egsngnGAVQLMFAELQMLTPLVPtREVYFVRCCKKLSDEQWAIVDVSIDKVEDNI-DASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTIHTL 457
                 99****************************************************98.9***************************************** PP

                 HHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 181 lrslvksglaegaktwvatlqrqcek 206
                 +r +v+sgla+ga++w +tlq qce+
  RDX88552.1 458 FRAFVNSGLAFGARHWIETLQLQCER 483
                 ************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 744 aa     Download sequence    
MGVNMSNKLP HTKDLSSPAL SLSLAGIFRH AEEAAAETSG MEVVGDEVRR EDTVEFSSDN  60
SGPMRSRSED NFDGEGTHEN DDNNNENNPE KKKRKYHRHT AEQIREMEAY ESPHPDEKQR  120
LQLSKQLGLA PRQVKFWFQN RRTQIKAIQE RHENSLFKTE LEKLREENKA MRETINKSCC  180
PNCGTVTAID GSISTEEKQL RIENAKLKAE VKKLRTALGK CSPRTTSPSS SAGHDEEESR  240
SSLAFYNGIF GLEKSRITDI VNRATEEFIK MANMGEPLWV RSVETGREIL NYDEYVKEFA  300
VENSCTERPK TFIEVSRETG LVFMDLPRLV QSFLDVNQWK EMFPCLISKA ATVDVVCNRE  360
GSNGNGAVQL MFAELQMLTP LVPTREVYFV RCCKKLSDEQ WAIVDVSIDK VEDNIDASLV  420
KCRKRPSGCI IEDKSNGHCK VIWVEHLECQ KSTIHTLFRA FVNSGLAFGA RHWIETLQLQ  480
CERLVFNMAT NVPTKDSTGV ASLAGRKSIL KLAQRMTWSF CHAVGASSFH TWTKITGKTG  540
EDIRISSRKN LNDPGEPLGV ILSAVSSVWL PVSPNVLFDF LRDEARRSEW DIMSSGGSVQ  600
SITNLAKGKD RGNVVNIQKM QSKDNSVWIL QDSCTSAYES MVVYAPVEFA GIQSVMSGCD  660
SSNVAVLPSG FSILPDGIET RPLVITSRQE EKGTDQGGSL FTMAFQIIAN ASPAKLTMES  720
VEPVNNLVSC TLRNIRTSLQ CEDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein