PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88578.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 268aa MW: 30210.3 Da PI: 9.4907

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	112	131	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ RDX88578.1 112 FSCTVCNKTFNRFNNMQMHM 131 89*****************9 PP
2	zf-C2H2	13.2	0.00027	197	219	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k F + + ++H +++ RDX88578.1 197 FECRKCHKAFAVRGDWRTHEKNC 219 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MQKTYTFSCM SSCGSDHSGC LLESDEVDKE EWISLSLGPP SQVKSKAGNP KQYSSTMRDE 60 KQNPTSHDDL NGVTVALHIG LPTTATKPSS TPIHGRYWIP TPQQILIGPT QFSCTVCNKT 120 FNRFNNMQMH MWGHGSQYRK GAESLRGSKT GSSMLRVPCY CCEEGCKNNI NYPRSRPLKD 180 FRTLQTHYKR KHGGKPFECR KCHKAFAVRG DWRTHEKNCG RLWFCVCGSD FKHKRSLKDH 240 VRAFGNGHAP HTFSGDDAAS QVLLVTFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-114	C2H2 family protein