PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88608.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 475aa MW: 52577.8 Da PI: 7.0817

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.6	6.9e-06	366	404	11	54
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L RDX88608.1 366 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 404 5778999********998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MSDDQFQASG NWWETARNVR FESGESQSSS SGLTNMGNYG WQHDMARSSS MDNSASGGSS 60 SVVFHDQKQL QVQPHHDSAT STNDPNLHMM GLGLSSQPMD WNQASLQLRG EKGSEGSFRS 120 MLQENLSSSG TNFQQESGNS NIGLSHHHHQ HQHQHQHHQQ VHWRPEKLFC AESSSNEFKR 180 GFSLDQTQFS PQYSSGDSTV TSQGLPCTFQ MDYVGNPSSI LQGLLGPESN NQQPHQGSGS 240 FENRPMNFPY SPASYGLNSN IELVPSWSKV PQFLRASPPK QPPNNQLHFT NNAPFWNASS 300 EPAIKDSRST FIPSLQPPFS TSNFDVQSKN ISEVRESGGV VKKSGSEAPP KRPRNETPSP 360 MPAFKVRKEK MGDRITALQQ LVSPFGKTDT ASVLSEAIEY IKFLHEQVTV LSTPYMKSGA 420 PIQHQQSSGK SKECEGPKQD LRSRGLCLVP VSSTFPVTHE PTVEYWTPTF GGTYR

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MSDDQFQASG NWWETARNVR FESGESQSSS SGLTNMGNYG WQHDMARSSS MDNSASGGSS  60
SVVFHDQKQL QVQPHHDSAT STNDPNLHMM GLGLSSQPMD WNQASLQLRG EKGSEGSFRS  120
MLQENLSSSG TNFQQESGNS NIGLSHHHHQ HQHQHQHHQQ VHWRPEKLFC AESSSNEFKR  180
GFSLDQTQFS PQYSSGDSTV TSQGLPCTFQ MDYVGNPSSI LQGLLGPESN NQQPHQGSGS  240
FENRPMNFPY SPASYGLNSN IELVPSWSKV PQFLRASPPK QPPNNQLHFT NNAPFWNASS  300
EPAIKDSRST FIPSLQPPFS TSNFDVQSKN ISEVRESGGV VKKSGSEAPP KRPRNETPSP  360
MPAFKVRKEK MGDRITALQQ LVSPFGKTDT ASVLSEAIEY IKFLHEQVTV LSTPYMKSGA  420
PIQHQQSSGK SKECEGPKQD LRSRGLCLVP VSSTFPVTHE PTVEYWTPTF GGTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	2e-85	bHLH family protein