PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88644.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

YABBY

Protein Properties

Length: 180aa MW: 20108.9 Da PI: 8.6062

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	208.6	2.2e-64	6	157	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklse 103 ++e+vCyv+CnfCntilavsvP++sl+++vtvrCGhC++llsvn+ + q+ + ++ ++++l ++e + k+ +++++++ + e RDX88644.1 6 MATERVCYVHCNFCNTILAVSVPYSSLLTLVTVRCGHCANLLSVNMGASLQAFPPQDP--------QKQHLSFAEPSSKELGSSSKCNKL-APF----E 91 689***********************************************999995........667777777776666655555433.333....3 PP YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 ++e pr+pp irP ekr rvPsaynrfikeeiqrikasnPdishreafs aaknWahfP+ihfgl RDX88644.1 92 AVEHEQPRIPP-IRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGL 157 45778899999.9**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MSMEMMATER VCYVHCNFCN TILAVSVPYS SLLTLVTVRC GHCANLLSVN MGASLQAFPP 60 QDPQKQHLSF AEPSSKELGS SSKCNKLAPF EAVEHEQPRI PPIRPTEKRH RVPSAYNRFI 120 KEEIQRIKAS NPDISHREAF SSAAKNWAHF PHIHFGLKLD GNKQGKLDQG EGGEKSNGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	1e-84	YABBY family protein