PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX88810.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

M-type_MADS

Protein Properties

Length: 191aa MW: 22341.1 Da PI: 10.3206

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX88810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	50	3.9e-16	11	51	3	43
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43 i n s+r++t+ kR+ng++KK E+S+LC++e++ ii+ ++ RDX88810.1 11 ITNASKRKITLKKRKNGLIKKMDEISTLCEIEACAIIYTPN 51 89************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MTRKKVDLMY ITNASKRKIT LKKRKNGLIK KMDEISTLCE IEACAIIYTP NDPKPEVWPS 60 DSGVKRVISR FRGLSELKQS KKMLNQESLL RQMITKAQEQ LRKQRNENRK KEMTHLMFQY 120 LTLGKIFDNP SLIDLNDLLW LINLNLNEIE KNINKIQIQE VTPIIENGGP QGHLHHVQGL 180 ETNMDTVQKR Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3	25	RKKVDLMYITNASKRKITLKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48670.1	2e-42	M-type_MADS family protein