PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX88877.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 307aa    MW: 35039.4 Da    PI: 6.6322
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX88877.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.14.1e-182067148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll+++++++G g+W+  a+  g++Rt+k+c++rw++yl
       RDX88877.1 20 RGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRTGKSCRLRWLNYL 67
                     89********************************************97 PP
2Myb_DNA-binding53.36.2e-1773116146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++
       RDX88877.1  73 RGNLTPQEQLLILDLHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 116
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MSTIAKRDLS SNEEESELRR GPWTLEEDSL LIHYIARHGE GRWNMLAKSA GLKRTGKSCR  60
LRWLNYLKPD IKRGNLTPQE QLLILDLHSK WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK  120
QARQLNIESG SKRFIDAVKC FWMPRLLQKM EQNNSPSPHP SMTNMMNLGN SGEASSMSSM  180
SSGFNIPSMS SSSSPPQREF IMDGANHFST MANPINPSPD SFQISQLLEL SEHPKSPPNM  240
LENNVYSYPI QDNCYIDANN YGVESLNMDP LSAMETYDFP QFDFQTAGSG WMLDSTSDTT  300
LWNMDAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.19e-85MYB family protein