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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX89051.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 180aa MW: 20193.7 Da PI: 9.6168 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 56.9 | 5e-18 | 57 | 106 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g
RDX89051.1 57 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYATPVAAARAYDTAVFCLRG 106
69*****99.**********9...336*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 180 aa Download sequence |
MVWGQRKKAS SVYEQNLPTT ALLGYQMEEE GLGLGDCCSS NLTITRKSEK RKHQEKPYRG 60 IRMRKWGKWV AEIREPNKRS RIWLGSYATP VAAARAYDTA VFCLRGPSAR LNFPELLFQD 120 DDVSTQQGNM SADSIRKKAT QVGARVDALQ TALQTSSSHS ASSHVTSEKP DLNEYPKPED |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G46768.1 | 2e-47 | ERF family protein | ||||




