PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX89327.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

M-type_MADS

Protein Properties

Length: 489aa MW: 55244.1 Da PI: 5.0692

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX89327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	41.9	1.3e-13	9	52	1	44
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44 k+i+n + r f kR++ ++KK +E S+ C++++++i++ +g RDX89327.1 9 KPISNRRERDLAFMKRKKALMKKMSEFSTVCGVKACLIMYDGNG 52 68*************************************97666 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MGRPKLILKP ISNRRERDLA FMKRKKALMK KMSEFSTVCG VKACLIMYDG NGDAPPLTWP 60 QDPNEVHSII ERYEGVKNEK LPKNFDLNNF FENKKNMVEG EISKVQKETL KIKYPTWHPC 120 FNNLGIEELR NFMARLDIKL ETCNRQRMKM LRKHQIEAAN FNLMQCMVQS ESAGPNPTQL 180 NFMQNISQNQ LILAPPMMPL NDGNLVTSYL LNLDRGSSSQ SQILNRGSSS QSHIPDRGSS 240 SQSQILDKCS SSQSQILDKG SSSQYQMLNF DPNLMQLREK NKGVVHITNH VDVPLDCTNQ 300 IHAFENSTNQ LDVPLDCANQ IGAFENSTNQ LDVPLDCANQ IETFGNSTNQ LDMPIDLTTA 360 LDECLDYFSQ LCEIEDLTGQ FDEVVNWTSQ PDESINWLNQ HSVPVIGGST KAMNGATNYD 420 TNFHGYENNP ESSLCNYNGG IQSMQSYNYN VAYENIASQS QNVTLPPPVD GFQTNHYNML 480 QNPSLNQII

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MGRPKLILKP ISNRRERDLA FMKRKKALMK KMSEFSTVCG VKACLIMYDG NGDAPPLTWP  60
QDPNEVHSII ERYEGVKNEK LPKNFDLNNF FENKKNMVEG EISKVQKETL KIKYPTWHPC  120
FNNLGIEELR NFMARLDIKL ETCNRQRMKM LRKHQIEAAN FNLMQCMVQS ESAGPNPTQL  180
NFMQNISQNQ LILAPPMMPL NDGNLVTSYL LNLDRGSSSQ SQILNRGSSS QSHIPDRGSS  240
SQSQILDKCS SSQSQILDKG SSSQYQMLNF DPNLMQLREK NKGVVHITNH VDVPLDCTNQ  300
IHAFENSTNQ LDVPLDCANQ IGAFENSTNQ LDVPLDCANQ IETFGNSTNQ LDMPIDLTTA  360
LDECLDYFSQ LCEIEDLTGQ FDEVVNWTSQ PDESINWLNQ HSVPVIGGST KAMNGATNYD  420
TNFHGYENNP ESSLCNYNGG IQSMQSYNYN VAYENIASQS QNVTLPPPVD GFQTNHYNML  480
QNPSLNQII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G55690.1	3e-18	M-type_MADS family protein