PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX89894.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 264aa MW: 30532.2 Da PI: 8.4305

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX89894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.8	2.6e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELSvLCdaev +i+fsstgkl++yss RDX89894.1 9 KKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGLIVFSSTGKLFDYSS 59 68***********************************************96 PP
2	K-box	54.1	6.8e-19	121	204	17	100
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++akL kei +e+ ++Ge+L+ L l+eLqqLe++Le +l ++ + K++ +++qi+elqkke l+eenk L+kklee RDX89894.1 121 EASNSAKLSKEIADRTQELSWMKGEELQGLGLNELQQLEKRLEIGLDRVIEIKEKRMMNQISELQKKEILLEEENKHLKKKLEE 204 556789***************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MTRSKIKIKK IDNITARQVT FSKRRRGLFK KAEELSVLCD AEVGLIVFSS TGKLFDYSSS 60 RYVRHHRTLL TFLSVFIYIY IINKYIYNYT CIDMNDIIRR YNTHSHGINK LDRPSLELQL 120 EASNSAKLSK EIADRTQELS WMKGEELQGL GLNELQQLEK RLEIGLDRVI EIKEKRMMNQ 180 ISELQKKEIL LEEENKHLKK KLEEREMEAM RKAKIAFMAD SDMGMQEEGV SLESPNNISS 240 CISDPPLEDG SSDTSLKLGL PFSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	2e-50	MIKC_MADS family protein