PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX90629.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 146aa MW: 16886.2 Da PI: 8.9956

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX90629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	119.2	2.3e-37	5	104	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaC+ +rrkC++dC+++pyfp+++p+++a v++++G snv k+lk++p r +a++sl+yeA++r++dP+yG++g+i++l qq++++++el+++++ RDX90629.1 5 RCAACRNQRRKCPSDCIFSPYFPSNDPQRYASVRRIYGGSNVGKMLKQIPLYVRAHAADSLYYEAQCRIQDPIYGCYGIISRLVQQIHNTETELVKIQA 103 6*********************************************************************************************99987 PP DUF260 100 e 100 + RDX90629.1 104 Q 104 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence
MISGRCAACR NQRRKCPSDC IFSPYFPSND PQRYASVRRI YGGSNVGKML KQIPLYVRAH 60 AADSLYYEAQ CRIQDPIYGC YGIISRLVQQ IHNTETELVK IQAQNSILKL QNPQVEYVIN 120 MDDLFAQRNM GQFQFGDHSS QTHWFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	1e-44	LBD family protein