PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX90835.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 341aa    MW: 38481.3 Da    PI: 7.6726
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX90835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.86.9e-104987148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+lv++++ +G +       +++  R++k+c++rw +yl
       RDX90835.1 49 RGLWSPEEDEKLVRYINTHGHK-------RLQ--RCGKSCRLRWINYL 87
                     788*****************88.......887..************97 PP
2Myb_DNA-binding55.51.3e-1793136146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T+eE+++++d ++ lG++ W+ Ia++++ gRt++++k++w++
       RDX90835.1  93 RGSFTAEEEQIIIDIHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 136
                      89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MYYITSNVSI YKSSAAKTST KCSILSREEC LNHNLEMGHR CCSKQKIKRG LWSPEEDEKL  60
VRYINTHGHK RLQRCGKSCR LRWINYLRPD LKRGSFTAEE EQIIIDIHRI LGNRWAQIAK  120
HLPGRTDNEV KNFWNSCIKK KLISQGLDPQ THTLLSSRRR TSACNISNIH QNSNSIFIMS  180
SPNAPVETTS QTFSSLPKPP PNIVQTPSSI VPSSIVSSDL PYELLMDNSS NICSPSYMNP  240
LAVELSNNEN SVNWVSRVNA EDFSAQIVEE GTQVQVQQEK DKTCENKGNL ETSASYESSN  300
FDFGLLMESV LSSEFISHDV NCMDDLLRSG ELQKNNSSLG I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.16e-78MYB family protein