PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX90842.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 348aa MW: 38933 Da PI: 8.3759

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX90842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	23	2.1e-07	194	216	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ Cgk F+r nL+ H+r H RDX90842.1 194 YFCQVCGKGFTRDANLRMHMRAH 216 78*******************99 PP
2	zf-C2H2	11.4	0.001	284	307	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + RDX90842.1 284 YVCNRCNqKQFSVLSDLRTHEKHC 307 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MAKATSPSSN DFQEQQMFPV NEYLVSVSPS ASASHSSTSL LFYLSLLKDK LNQLQNLVDS 60 STPMAINATI QEIIVAATSM RFTCQQMILG SSPGTTNELH HQQIDHDRLL PPHHHQSNLM 120 NNNRGVSCNV NLASNIIRGQ SSFLSNIEGE AIDWFPESYN NSENSSIKDD EGNVRGESDI 180 IELHAADLLA KYSYFCQVCG KGFTRDANLR MHMRAHGEEY KTSAALSNPM KKKESVLGEG 240 SGTKKYSCPQ EGCRWNQRHA KFQPLKSMIC AKNHYKRSHC PKMYVCNRCN QKQFSVLSDL 300 RTHEKHCGDP KWQCSCGTTF SRKDKLVGHV ALFVGHTPAI SGFSMTKY

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MAKATSPSSN DFQEQQMFPV NEYLVSVSPS ASASHSSTSL LFYLSLLKDK LNQLQNLVDS  60
STPMAINATI QEIIVAATSM RFTCQQMILG SSPGTTNELH HQQIDHDRLL PPHHHQSNLM  120
NNNRGVSCNV NLASNIIRGQ SSFLSNIEGE AIDWFPESYN NSENSSIKDD EGNVRGESDI  180
IELHAADLLA KYSYFCQVCG KGFTRDANLR MHMRAHGEEY KTSAALSNPM KKKESVLGEG  240
SGTKKYSCPQ EGCRWNQRHA KFQPLKSMIC AKNHYKRSHC PKMYVCNRCN QKQFSVLSDL  300
RTHEKHCGDP KWQCSCGTTF SRKDKLVGHV ALFVGHTPAI SGFSMTKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	3e-98	C2H2 family protein