PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX90843.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 329aa MW: 35773 Da PI: 8.0338

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX90843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00077	125	147	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H RDX90843.1 125 YECKTCNRTFPSFQALGGHRASH 147 99**********99999998887 PP
2	zf-C2H2	11.3	0.0011	203	223	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cg F++ L H+r+H RDX90843.1 203 CSICGSEFTSGQALGGHMRRH 223 ********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MEMEGLDSNS QHNVAKGKRT KRMRLLSPNG VTATTTIVAT TVMTTSSCSS ANSGGSSTTT 60 YESEEEDMAN CLILLAQGGE SHLRHDKQQV DYPLENCDGV KTEKGNGNTS STTTSVNTKV 120 GFYIYECKTC NRTFPSFQAL GGHRASHKRP KLVAEEKKPP PSQLPHLIIT NYDGFEETHV 180 KSGPPISLQF GSNNNNKGKI HGCSICGSEF TSGQALGGHM RRHRASTNNP NTVDTTSSNT 240 AVTTTQPPRR NILQLDLNLP APEDDLREAK FQFTATQVLL NDLFLTHTGY HIPTPFINDK 300 NKGFAITGFD KYATAICISV TMSLSPTII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-45	C2H2 family protein