PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX90871.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

GRF

Protein Properties

Length: 344aa MW: 39233 Da PI: 8.2149

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX90871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.1	4.2e-25	78	122	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e RDX90871.1 78 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEV 122 79****************************************985 PP
2	QLQ	56.5	8.5e-20	12	48	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT++Q+q+L++Q+l++Ky++ + P+Pp+L++ i++ RDX90871.1 12 SPFTPTQWQELEQQALVFKYMVTGTPIPPDLIFSIKR 48 89*******************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MMSASASARN RSPFTPTQWQ ELEQQALVFK YMVTGTPIPP DLIFSIKRSL DSSISSRLFP 60 HHPIGWGCFE MGFGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGRNRSRKPV 120 EVSSTTSTAT NTSQTIPSYS RNPSLTNPNI TSPSSFPFSP LPSSIPSDSQ PFSQSYQNSS 180 LNPFFYSQST SSRPQDSDFP PQDATTHQLF MDSASYSHDD KDYRHVHGIR EDVDERAFFP 240 EASGSARSYT DSYQQLSMSS YKSYSNSNFQ NMNDNNNQRQ QQEQPHCFVL GTDFKSTRPS 300 KEKEAETTTT TSQRPLHRFF GEWPPKNTDS WLDLASNSRI PTDE

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MMSASASARN RSPFTPTQWQ ELEQQALVFK YMVTGTPIPP DLIFSIKRSL DSSISSRLFP  60
HHPIGWGCFE MGFGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGRNRSRKPV  120
EVSSTTSTAT NTSQTIPSYS RNPSLTNPNI TSPSSFPFSP LPSSIPSDSQ PFSQSYQNSS  180
LNPFFYSQST SSRPQDSDFP PQDATTHQLF MDSASYSHDD KDYRHVHGIR EDVDERAFFP  240
EASGSARSYT DSYQQLSMSS YKSYSNSNFQ NMNDNNNQRQ QQEQPHCFVL GTDFKSTRPS  300
KEKEAETTTT TSQRPLHRFF GEWPPKNTDS WLDLASNSRI PTDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-56	GRF family protein