PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX90974.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 281aa    MW: 30861.6 Da    PI: 7.7735
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX90974.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.72.3e-19109163256
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 rk+ +++keq  +Lee F+++++++ ++++ LAk+l+L  rqV vWFqNrRa+ k
  RDX90974.1 109 RKKLRLSKEQAMVLEETFKEHNTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 163
                 788899***********************************************98 PP
2HD-ZIP_I/II127.17.4e-41109198191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  +kk+rlskeq+ +LEe+F+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
   RDX90974.1 109 RKKLRLSKEQAMVLEETFKEHNTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-AL 198
                  69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MSFKFCVNFA SATDSPCASC DTDRSSETRS FLRGIDVNLA PPPPPTAACD DDNGVSSPNS  60
TISSISGKRS EREGNGDENE RASCSRGGSD DDDGGGCGGD GDGDGDTSRK KLRLSKEQAM  120
VLEETFKEHN TLNPKQKQAL AKQLNLRPRQ VEVWFQNRRA RTKLKQTEVD CEYLKRCCEN  180
LTEENRRLQK EVQELRALKL SPQLYMHMNP PTTLTMCPSC ERVAVSSASS SSSATTPSAP  240
PPANCNPLGH TIQRPVPVNP WAAMSIQRRF VMPHAEKRCV I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108114SRKKLRL
2158166RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.17e-85HD-ZIP family protein